On 04/19/2013 07:44 AM, Jose Trejo wrote: > I have been using the program to assemble the transcriptome of an organism > without a good quality genome. The purpose of this transcriptome is to be > used for differential expression analysis. This list is for Trinity Desktop Environment, not Trinity RNA-Seq Assembly. I don't think we can help you with genome sequencing. -- PGP key: http://homestead-products.com/pubkey.htm