Hi Baron,
if you can reproduce it in a regular way, please open a bug report, so we won't forget this problem over time.
Please include the steps you mentioned. 

> this kind of thing happens because file managers, even in 2014, do not redraw the content of the directories as soon
> as changes are made in their content. 
Konqueror in TDE has this refresh problem, and it annoys me a lot. it is definitely something we will have to look at after v14.0.0 has been released.

Cheers
  Michele